MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Microbacterium paludicola
19428wA4_P1012
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 3,293,562 bps
CDS: 3,068
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 3,124
Total number of protein coding genes annotated/found:
3,068
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5044|JADGLL010000039.1
SEQF5044_01767
Genome Viewer
NA
AA
912/304
1901-990
HTH-type transcriptional regulator GltC
SEQF5044|JADGLL010000039.1
SEQF5044_01768
Genome Viewer
NA
AA
3453/1151
2001-5453
1-pyrroline-5-carboxylate dehydrogenase
SEQF5044|JADGLL010000039.1
SEQF5044_01769
Genome Viewer
NA
AA
192/64
5701-5892
Arginine biosynthesis bifunctional protein ArgJ
SEQF5044|JADGLL010000039.1
SEQF5044_01770
Genome Viewer
NA
AA
861/287
7501-6641
Pyrroline-5-carboxylate reductase
SEQF5044|JADGLL010000039.1
SEQF5044_01771
Genome Viewer
NA
AA
666/222
7715-8380
HTH-type transcriptional regulator LutR
SEQF5044|JADGLL010000039.1
SEQF5044_01772
Genome Viewer
NA
AA
1185/395
8471-9655
Hydrogen cyanide synthase subunit HcnC
SEQF5044|JADGLL010000039.1
SEQF5044_01773
Genome Viewer
NA
AA
345/115
9652-9996
Hydrogen cyanide synthase subunit HcnA
SEQF5044|JADGLL010000039.1
SEQF5044_01774
Genome Viewer
NA
AA
1476/492
9993-11468
Ferredoxin--NADP reductase
SEQF5044|JADGLL010000039.1
SEQF5044_01775
Genome Viewer
NA
AA
927/309
11487-12413
putative DapA-like lyase
SEQF5044|JADGLL010000039.1
SEQF5044_01776
Genome Viewer
NA
AA
1017/339
12415-13431
4-hydroxyproline 2-epimerase
SEQF5044|JADGLL010000039.1
SEQF5044_01777
Genome Viewer
NA
AA
1521/507
13431-14951
NADP-dependent fatty aldehyde dehydrogenase
SEQF5044|JADGLL010000039.1
SEQF5044_01778
Genome Viewer
NA
AA
315/105
14948-15262
hypothetical protein
SEQF5044|JADGLL010000039.1
SEQF5044_01779
Genome Viewer
NA
AA
972/324
15259-16230
hypothetical protein
SEQF5044|JADGLL010000039.1
SEQF5044_01780
Genome Viewer
NA
AA
1023/341
16417-17439
Ribose import binding protein RbsB
SEQF5044|JADGLL010000039.1
SEQF5044_01781
Genome Viewer
NA
AA
1521/507
17479-18999
Arabinose import ATP-binding protein AraG
SEQF5044|JADGLL010000039.1
SEQF5044_01782
Genome Viewer
NA
AA
1002/334
18996-19997
Ribose import permease protein RbsC
SEQF5044|JADGLL010000039.1
SEQF5044_01783
Genome Viewer
NA
AA
2079/693
20035-22113
Acetophenone carboxylase gamma subunit
SEQF5044|JADGLL010000039.1
SEQF5044_01784
Genome Viewer
NA
AA
1722/574
22110-23831
Acetophenone carboxylase delta subunit
SEQF5044|JADGLL010000039.1
SEQF5044_01785
Genome Viewer
NA
AA
1251/417
23828-25078
Imidazolonepropionase
SEQF5044|JADGLL010000039.1
SEQF5044_01786
Genome Viewer
NA
AA
990/330
25075-26064
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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